answers.goldenhelix.comQuestions - Golden Helix Answers

Hi there! Please sign in help tags users badges ALL UNANSWERED Ask Your Question RSS Sort by » by date by activity ▼ by answers by votes 170 questions Tagged 2 views no answers no votes 2021-04-12 08:01:18 -0600 Lucas Michel Todo Dark reads in pile-up track pile-up 35 views 2 answers no votes 2020-12-08 03:33:07 -0600 Christian Altorfer reads fragments 40 views 1 answer no votes 2020-09-08 10:30:25 -0600 Gabe Rudy Why is the coverage track not grey anymore? coverage pile-up variants 1k views 1 answer no votes 2020-08-11 08:30:51 -0600 Gabe Rudy How can I load a file in CRAM format into my GH browser? 585 views 1 answer no votes 2019-12-18 16:30:21 -0600 Gabe Rudy Display phasing in VCFs Phasing phase GenomeBrowser 260 views 1 answer no votes 2019-11-15 15:53:20 -0600 Gabe Rudy When I try to add a BAM file to a project that already has several BAM files, I get this: "BAM file truncated (error code 3)" What causes this error? I see no list of error codes in the GH manual. 347 views 1 answer no votes 2019-09-13 16:34:38 -0600 Gabe Rudy "Current filters hide all data sources" Filters hide all data sources 251 views 1 answer no votes 2019-09-13 16:25:46 -0600 Gabe Rudy I have a folder of BAM files I wish to open with GB (GH) 102 views 1 answer no votes 2019-08-12 14:30:23 -0600 Gabe Rudy How do I add field to style by option in controls style 348 views 1 answer no votes 2019-06-28 10:28:12 -0600 Gabe Rudy export information on sequence reads browser. data export 142 views no answers no votes 2019-04-29 05:32:04 -0600 Angelica Bianco To implement refseq genome refseq 537 views 1 answer no votes 2019-04-25 13:30:23 -0600 Gabe Rudy Converting 23andMe raw data 23ANDME Convert 45 views no answers no votes 2019-02-27 18:14:04 -0600 Haskan Kaya gautil coverage failing to identify genome assembly gautil mac 2k views no answers no votes 2019-01-23 10:19:26 -0600 Koray Malci S.cerevisiae genome yeast Saccharomyces cerevisiae 278 views 2 answers no votes 2018-10-09 04:45:12 -0600 Tibor Vaszkó Why does GenomeBrowse terminate when clicking to Plot icon? unexpected termination 37k views no answers no votes 2018-09-04 10:31:48 -0600 Gabe Rudy HGMD integration HGMD GeneralInquiry 56 views no answers no votes 2018-07-17 11:02:44 -0600 Michael Volodarsky CNV breakpoints in read pile-up 82 views no answers no votes 2018-07-17 03:45:11 -0600 Kevin Wu Command line for capturing snapshots command-line ubuntu 197 views 1 answer no votes 2018-05-09 13:27:27 -0600 Gabe Rudy Error logging into GenomeBrowse with SSH handshake failed 160 views no answers no votes 2018-03-01 01:57:56 -0600 Sahar Dehghan How to convert column type when there are too many columns? 113 views no answers no votes 2018-01-24 08:33:04 -0600 Rebecca Smith How can I know the minimum coverage of a sequenced region? coverage bin size 72 views no answers no votes 2018-01-23 04:44:29 -0600 r f Converting GTF using custom Genome GenomeBrowser gtf custom-gtf 65 views no answers no votes 2018-01-08 13:16:41 -0600 Dan Cohn Any way to import an ORegAnno track? 73 views no answers no votes 2017-12-19 14:33:37 -0600 Leonard Edelstein I would like to use a bedgraph file from NCBI GEO 107 views no answers no votes 2017-12-17 08:14:16 -0600 Whit Athey What exactly does the brown shading in a sequence represent? 563 views 1 answer no votes 2017-11-09 15:39:10 -0600 SteveHystad How can I exclude an custom assembly? exclude 221 views 1 answer no votes 2017-11-09 15:34:26 -0600 Gabe Rudy Stranded Paired-end RNA-seq coloring and wig/bw support 549 views 1 answer no votes 2017-11-09 15:17:39 -0600 SteveHystad Unable to Match Data in this Source with Reference error contig length 223 views 1 answer no votes 2017-11-09 15:06:56 -0600 SteveHystad How to sort chromosomes in Golden Helix Genome Browser? 176 views 1 answer no votes 2017-09-21 11:42:46 -0600 SteveHystad how to visualise sorted bam files? sorted visualise 1 2 3 4 5 ... 6 next page » Welcome to the GenomeBrowse answers site! We encourage community participation, so feel free to jump in and answers questions as well as ask them. We are logged in daily and try to answer questions promptly, but be aware that time zone differences and general support load may prevent an immediate response to questions. Contributors Tags BAM × 3 coverage × 2 data × 2 genome × 2 GenomeBrowser × 2 pile-up × 2 23ANDME × 1 alignment × 1 all × 1 bin × 1 browser. × 1 cerevisiae × 1 command-line × 1 contig × 1 Convert × 1 custom-gtf × 1 error × 1 exclude × 1 export × 1 Filters × 1 gautil × 1 GeneralInquiry × 1 gtf × 1 HGMD × 1 hide × 1 length × 1 mac × 1 phase × 1 Phasing × 1 refseq × 1 Saccharomyces × 1 size × 1 sorted × 1 sources × 1 style × 1 termination × 1 ubuntu × 1 unexpected × 1 variants × 1 visualise × 1 yeast × 1 Copyright Goldenhelix, 2012-2015. Powered by Askbot version 0.7.51 Please note: Golden Helix requires javascript to work properly, please enable javascript in your browser, here is how...